Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928560.1_cds_XP_016476119.1_67978
CDS Infomation

[gene=LOC107797717] [db_xref=GeneID:107797717] [protein=uncharacterized protein LOC107797717 isoform X3] [protein_id=XP_016476119.1] [location=complement(join(31147..31434,31722..31815,31961..32182,32904..32974,33148..33270,33353..33436,34188..34451,34525..34581,34706..34774,35965..36114,36534..36636,37845..37906,38360..38443,38779..38817,38907..39010,39282..39372,40491..40529))] [gbkey=CDS]
Sequence

ATGCAACTTTACGTGCTAGGATCAAAGAATTGGAGCGCGAGCGTGATGAATTGCATAAAG
ATATTGAACAACTATGCATGCAACAAGCTGGACCTAGCTATATTGGGGTGCCTACTCGTC
CTCTTCATAGCTGGGTTGGAGCAGGAGACTGAAAACTTGAAAAAGAAACTAGCTGCTTGC
ACACGAGAAAATCAGAATCTTCAAGAAGAGCTGTCAGAAGCTTATCGCATCAAAAGTCAA
CTGGCTGATCTACACAGTGCAGAAGTTTCCAAGAATATAGAAGCAGAAAAGCAGCTTAAA
TTTTTCCAAGGTTGTGTTGCTGCTGCATTTGCTGAGCGGGACCATGCCGTAATGGAGGCT
GAAAAGGCTAAGGAAAAGGAGGAGCTTGTGTCAAGAGGATTTCATGAACTTCAGCAAAGG
ATTGAAGAGCTAAACTGTGAATTACTTGAAGAGAAAATATTGACGGCTACTTTACAGAGT
GATTTGGACAGGGAAGAGAGGTTGGATGAGGCTTTCAAGGAGGTTGTTCATAAGTTCTAT
GAGATCAGACAGCAATCATTGGAGGATATTGAAGATGTCTCCTGGGAAGACAAATGTGGG
TGCCTCCTGCATGATTCGTCTGAAATGTGGACTTTCAGAAATCCTGGGGAAACATCCACC
TCGAAGTACATTAGTGCTCTGGAAGAACAAGTGGAGACACTACGAAAATCTTTGGATAAT
CTTCAGAACAAGCTACAAATGGGTCTTGAAATAGAAAATCACTTGAAGAAGAAAGTGCGT
GCCTTGGAAAAGCAGAAAATTCTTTCAGAAGAGAAGCTCAGGGCTCAAATATCGACATTT
CACCATTATCATTCTCAGCATAGACTTGATATTACAAGCTTACTTGATGAGGGATTTTCC
CATATTAAATCAGCTATGAACATGGTGGAAGAAAAGCTCAAGGGCTGCAGCATGAGCGAG
AGAGACTTAAATTCTTCTCAAGTAGATGATTTAAAGTTCAATGAACTTGAATTTCAAGAT
GTTCGGATAAACAATGATGATGGTTCAGATTTGATCTTTAAGAGGAACGAGCATTGCTTG
ACAACTACCACTACTGTTGGAAATAGTGATGCTTCTAAAGCCCTTGCTCTGGCACTAAAA
GAGAAGGTTGAAACATTATTACTTCTCTCACAACAAGAAGAAAGACACTTATTGGAGAGG
AATGTCAATGCAGCTATGCAGAAAAAAATTGAGGAGCTCCAGAGGAACTTACTACAAGTA
TTCTGCTGGGTTACAAATGAGAAGGTCAAAGCTCTCATGGAGTTGGCACAGTTGAAGCGG
GACCATCAATTACTGCAAGAGAAAGTTAATCAGGTCTCTAGACAAGGAAAATCTGTTGGT
GAGATTACAGTAAAAAGGCCTGTTCAGGAAAAAGATGGAAGATTGAAAAATCTGCTGAAA
ACTTCTTATTTGAGACGCTGGACTGGCATACAAGATGCAGATGGAAATGATGCTGACATT
CATCGAGATTCTGAGGTGATTTATGCTGATAGGAGGCCTGCCAATAGCATGGACTATGCT
AGGATGAAGATAGAGAATGCAACTCTAAAAGAGAGCTTAGAAAGTATGGATCATCTAATT
CGTGCAGTTAGGAGGCTTCGTCTTTCACTTTTAAAGGTTAAGGAGTCAGCTGCATCTGAA
GGAACGGAGTACTGCTCCTCGGAGTCGTTGGACACCATCATTAATGAGGCAAATCAGTTA
AAAACTGCACTAGGAAGCTCCCTCCCTCTTAGTTGGTCAGCAGAGGCAGATTCAGGATCA
CTCAGCGAACGTGTTGAGGAGGAGATAGATGTTAATGGACACTCTACCGGTGAAAACATG
GACTTTGTTTCTGCTGCTGGATTTGAGATGGTTGAGCTTTTGGTGTTAATTGCGCAGCTA
TTGAAAGAGGACAAGTGTAGTTGA

Peptide Sequence

PEP ID

XP_016476119.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107797717 isoform X3 [Nicotiana tabacum]
Sequence

MQLYVLGSKNWSASVMNCIKILNNYACNKLDLAILGCLLVLFIAGLEQETENLKKKLAAC
TRENQNLQEELSEAYRIKSQLADLHSAEVSKNIEAEKQLKFFQGCVAAAFAERDHAVMEA
EKAKEKEELVSRGFHELQQRIEELNCELLEEKILTATLQSDLDREERLDEAFKEVVHKFY
EIRQQSLEDIEDVSWEDKCGCLLHDSSEMWTFRNPGETSTSKYISALEEQVETLRKSLDN
LQNKLQMGLEIENHLKKKVRALEKQKILSEEKLRAQISTFHHYHSQHRLDITSLLDEGFS
HIKSAMNMVEEKLKGCSMSERDLNSSQVDDLKFNELEFQDVRINNDDGSDLIFKRNEHCL
TTTTTVGNSDASKALALALKEKVETLLLLSQQEERHLLERNVNAAMQKKIEELQRNLLQV
FCWVTNEKVKALMELAQLKRDHQLLQEKVNQVSRQGKSVGEITVKRPVQEKDGRLKNLLK
TSYLRRWTGIQDADGNDADIHRDSEVIYADRRPANSMDYARMKIENATLKESLESMDHLI
RAVRRLRLSLLKVKESAASEGTEYCSSESLDTIINEANQLKTALGSSLPLSWSAEADSGS
LSERVEEEIDVNGHSTGENMDFVSAAGFEMVELLVLIAQLLKEDKCS

Transcript Sequence

Gene sequence data has not been registered.